Introduction

This function is designed to perform multi-omics integrative analysis. According RNA modifications-related genes’ relative abundace in multi-omics, deepEA grouped genes into seven categories. For example, if users would like to integrate m6A with gene expression and translation, the following categories will be illustrated in a ternary plot:

  • Balanced
  • m6A dominant
  • m6A suppressed
  • Expression dominant
  • Expression suppressed
  • Translation dominant
  • Translation suppressed

Ternary plot showing the differences of each gene in three omics data sets

Detailed tabular information

Category differences between duplicated gene pairs

Category information in duplicated gene pairs